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Gene ID: 877707, updated on 12-Feb-2021
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Summary
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- Gene symbol
- PA0233
- Gene description
- transcriptional regulator
- Locus tag
- PA0233
- Gene type
- protein coding
- RefSeq status
- PROVISIONAL
- Organism
- Pseudomonas aeruginosa PAO1 (strain: PAO1)
- Lineage
- Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context
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- Sequence:
- NC_002516.2 (262557..263498)
NC_002516.2![PA0233 transcriptional regulator [Pseudomonas aeruginosa PAO1] - Gene (5)](https://i0.wp.com/www.ncbi.nlm.nih.gov/gutils/geneneighb.fcgi?geneid=877707&nuc_gi=110645304&n0=pcaD&n1=pcaC&n2=PA0233&n3=PA0234&n4=pcaK "PA0233 transcriptional regulator [Pseudomonas aeruginosa PAO1] - Gene (5)")
Genomic regions, transcripts, and products
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Go to reference sequence details
- Genomic Sequence:
- NC_002516.2
Go to nucleotide: Graphics FASTA GenBank
Bibliography
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Related articles in PubMed
- Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
- Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
- Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
- A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article
- Effect of anaerobiosis and nitrate on gene expression in Pseudomonas aeruginosa. Filiatrault MJ, et al. Infect Immun, 2005 Jun. PMID 15908409, Free PMC Article
See all (10) citations in PubMed
GeneRIFs: Gene References Into Functions
What's a GeneRIF?
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General gene information
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General protein information
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- Preferred Names
- transcriptional regulator
- NP_248924.1
-
- 'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'
NCBI Reference Sequences (RefSeq)
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Genome Annotation
The following sections contain reference sequences that belong to a specific genome build. Explain
Reference assembly
Genomic
-
NC_002516.2Reference assembly
- Range
- 262557..263498
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NP_248924.1 transcriptional regulator [Pseudomonas aeruginosa PAO1]
See identical proteins and their annotated locations for NP_248924.1
Status: PROVISIONAL
- UniProtKB/TrEMBL
- Q9I6Q5
- Conserved Domains (2) summary
-
- pfam00126
Location:11 → 68 - HTH_1; Bacterial regulatory helix-turn-helix protein, lysR family
- cl21456
Location:98 → 296 - Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
- pfam00126
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| Nucleotide | Protein | |
|---|---|---|
| Heading | Accession and Version | |
Additional links
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Gene LinkOut
The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.
- COMputational BRidges to Experiments
- Kyoto Encyclopedia of Genes and Genomes
- OrthoDB catalog of orthologs
- PANTHER Classification System
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Supplemental Content
Table of contents
- Summary
- Genomic context
- Genomic regions, transcripts, and products
- Bibliography
- General gene information
hom*ology
- General protein information
- NCBI Reference Sequences (RefSeq)
- Related sequences
- Additional links
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Related information
- BioProjects
BioProjects related to a gene
- Conserved Domains
Related CDD
- Full text in PMC
PMC links
- Full text in PMC_nucleotide
Full text in PubMedCentral identified from shared sequence links
- Functional Class
Functional class of the sequence domain architecture
- Gene neighbors
Overlapping genes and two nearest non-overlapping genes on either side
- Genome
Related Genome
- GEO Profiles
Related GEO
- Nucleotide
Link to related Nucleotide entry
- Protein
Link to related protein entry
- PubMed
Link to related PubMed entry
- PubMed(nucleotide/PMC)
Citations in PubMed identified from shared sequence and PMC links.
- RefSeq Proteins
Link to Protein RefSeqs
- Taxonomy
Link to related taxonomy entry
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